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BaseInfo

ncRNA ID	ath-miRf10480-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UCGACCUCUGGGUCGAGUGGU - NA
Stem-loop(if miRNA)	G      UCUU          UG            UCU   GAGA GU GUGAUG    CUACUCGACC  GGGGUCGAGUGG   GUU    U || ||||||    ||||||||||  ||||||||||||   ||| UA UACUGU    GGUGAGCUGG  CUCCAGCUCAUC   CGA    C   G      --UU          GU            -CU   AGUU
Stem-loop sequence	GUGGUGAUGUCUUCUACUCGACCUGGGGGUCGAGUGGUCUGUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY227642.1	ncRNA:21   UGGUGAGCUGGGUCUCCAGCU   1   ||||||||||||||||||||| targets:762   ACCACUCGACCCAGAGGUCGA   782 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
AY227642.1	ncRNA:21   UGGUGAGCUGGGUCUCCAGCU   1   ||||||||||||*|||||||| targets:853   ACCACUCGACCCCGAGGUCGA   873 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGGUGAGCUGGGUCUCCAGCU   1   |=||||||||||*|||||||| targets:1616   AUCACUCGACCCCGAGGUCGA   1636 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGGUGAGCUGGGUCUCCAGCU   1   |*||||||||||*|||||||| targets:1058   AGCACUCGACCCCGAGGUCGA   1078 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:21   UGGUGAGCUGGGUCUCCAGCU   1   *=|||||*|||=||||||||| targets:925   CUCACUCUACCUAGAGGUCGA   945 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget