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BaseInfo

ncRNA ID novel_ath_miR438
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:24605382-24605594 [-]
Reference genome TAIR10
Source SRR2219515
Length 28
Mature sequence(if miRNA) 1 - UUCAAAUUGUGAAUAGUAAAGUGAUUAU - 28
Stem-loop(if miRNA) --                 A      C                                  C               C     U            A  ----    G
  AGUCACUUUACUAUUCA AAUUUG AAAGUAGUCACUUUUCACUGUUUGAUUUGUACAC UAGAUCUGUACAACA UUUUA UGUACAGAUGUA GU    GUAC U
  ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||    |||| U
  UUAGUGAAAUGAUAAGU UUAAAC UUUCAUCAGUGAAAAGUGACAAACUAAACAUGUG AUCUAGACAUGUUGU AAAAU ACAUGUUUACAU UA    UAUG G
UA                 G      U                                  A               A     C            A  UUUU    U
Stem-loop sequence AGUCACUUUACUAUUCAAAAUUUGCAAAGUAGUCACUUUUCACUGUUUGAUUUGUACACCUAGAUCUGUACAACACUUUUAUUGUACAGAUGUAAGUGUACGUUGUGUAUUUUUAUAUACAUUUGUACACUAAAAAUGUUGUACAGAUCUAAGUGUACAAAUCAAACAGUGAAAAGUGACUACUUUUCAAAUUGUGAAUAGUAAAGUGAUUAU