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BaseInfo

ncRNA ID	novel_ath_miR416
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:28723958-28724036 [-]
Reference genome	TAIR10
Source	SRR2219508;SRR2219509;ERR562741
Length	19
Mature sequence(if miRNA)	61 - GUAAGAAGAAAGAAAAUGA - 79
Stem-loop(if miRNA)	--G           A      U G     CU  G   UAA    UAAGAAGAAAG AAAUGA G AGUUA  GU CUA   A    ||||||||||| |||||| | |||||  || |||    AUUCUUCUUUC UUUACU C UUAAU  UA GGU   A UAG           A      - G     CU  A   UGA
Stem-loop sequence	GUAAGAAGAAAGAAAAUGAUGGAGUUACUGUGCUAUAAAAAGUUGGAAUUCUAAUUGCUCAUUUACUUUCUUCUUAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_120549.3	ncRNA:19   AGUAAAAGAAAGAAGAAUG   1   |||||||||||||||||*= targets:332   UCAUUUUCUUUCUUCUUUU   350 Target Full Sequence	2.5	Arabidopsis thaliana Enhancer of polycomb-like transcription factor protein mRNA	Enhancer of polycomb-like transcription factor protein(AT5G04670)	coding protein	psRNATarget
NM_104450.4	ncRNA:19   AGUAAAAGAAAGAAGAAUG   1   ||||||||||*|||||||= targets:2501   UCAUUUUCUUCCUUCUUAU   2519 Target Full Sequence	2.5	Arabidopsis thaliana seed imbibition 1 (SIP1), mRNA	seed imbibition 1(SIP1)	coding protein	psRNATarget
NM_001341882.1	ncRNA:19   AGUAAAAGAAAGAAGAAUG   1   |==*||||||||||||||| targets:1530   UUGAUUUCUUUCUUCUUAC   1548 Target Full Sequence	3.0	Arabidopsis thaliana acyl-CoA binding protein 2 (ACBP2), mRNA	acyl-CoA binding protein 2(ACBP2)	coding protein	psRNATarget
NM_118916.3	ncRNA:19   AGUAAAAGAAAGAAGAAUG   1   |==*||||||||||||||| targets:1445   UUGAUUUCUUUCUUCUUAC   1463 Target Full Sequence	3.0	Arabidopsis thaliana acyl-CoA binding protein 2 (ACBP2), mRNA	acyl-CoA binding protein 2(ACBP2)	coding protein	psRNATarget
AF320561.1	ncRNA:19   AGUAAAAGAAAGAAGAAUG   1   |==*||||||||||||||| targets:1435   UUGAUUUCUUUCUUCUUAC   1453 Target Full Sequence	3.0	Arabidopsis thaliana putative membrane-bound acyl-CoA binding protein isoform 2 (ACBP2) mRNA, complete cds	NA	coding protein	psRNATarget
AF178947.1	ncRNA:19   AGUAAAAGAAAGAAGAAUG   1   |==*||||||||||||||| targets:1410   UUGAUUUCUUUCUUCUUAC   1428 Target Full Sequence	3.0	Arabidopsis thaliana acyl-CoA binding protein ACBP2 (ACBP2) mRNA, complete cds	NA	coding protein	psRNATarget
AY090256.1	ncRNA:19   AGUAAAAGAAAGAAGAAUG   1   |==*||||||||||||||| targets:1432   UUGAUUUCUUUCUUCUUAC   1450 Target Full Sequence	3.0	Arabidopsis thaliana AT4g27780/T27E11_20 mRNA, complete cds	NA	coding protein	psRNATarget