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BaseInfo

ncRNA ID	ath-miRf10477-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - CACUCGACCUCGGGGUCGAGU - NA
Stem-loop(if miRNA)	G AGA                      -A GG   GA  G  GG GGU A   CACUCGGCCUCGGGGUCGAGUG  U  AUC  GU AU  U ||| |   ||||||||||||||||||||||  |  |||  || || CUA U   GUGAGCUGGGGCUCCAGCUCAC  A  UAG  UA UG  C    G GUA                      AG AG   GG  G  GA
Stem-loop sequence	GGUGAAGACACUCGGCCUCGGGGUCGAGUGAUGGAUCGAGUGAUGGUCAGGUGAUGGGAUGAAGACACUCGACCUCGGGGUCGAGUGAUGUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY227642.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||||||||||||||| targets:856   ACUCGACCCCGAGGUCGAGUG   876 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||||||||||||||| targets:1619   ACUCGACCCCGAGGUCGAGUG   1639 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||=|||||||||||| targets:1866   ACUCGACCUCGAGGUCGAGUG   1886 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||||*|||||||||| targets:138   ACUCGACCCCCAGGUCGAGUG   158 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||||*|||||||||| targets:138   ACUCGACCCCCAGGUCGAGUG   158 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||*|||||||||||| targets:1152   ACUCGACCACGAGGUCGAGUG   1172 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   |||||||||||*||||||||| targets:1211   ACUCGACCCCGUGGUCGAGUG   1231 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   |||||||||*||||||||||* targets:765   ACUCGACCCAGAGGUCGAGUA   785 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||*|||||||||||* targets:1528   ACUCGACCACGAGGUCGAGUA   1548 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||||||||||||*|* targets:1061   ACUCGACCCCGAGGUCGACUA   1081 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||||*|||||||||* targets:1106   ACUCGACCCCCAGGUCGAGUA   1126 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT025674.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   ||||||||||*|||||||||* targets:189   ACUCGACCCCCAGGUCGAGUA   209 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
AY231407.1	ncRNA:21   UGAGCUGGGGCUCCAGCUCAC   1   |||||||||||*||||||||* targets:491   ACUCGACCCCGUGGUCGAGUA   511 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget