ncRNA ID | novel_ath_miR409 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:14028227-14028445 [+] |
Reference genome | TAIR10 |
Source | SRR2145250 |
Length | 21 |
Mature sequence(if miRNA) | 199 - UAUUGGAUUCAUUGCUAACUU - 219 |
Stem-loop(if miRNA) |
--    A           U   U     -A    AC   C   A    -AG      CC               U              -UG  -           A  AUC   GUUG CAAUGAAUCCA UAA UAUCA  UUGA  UUC UGU UAUG   UUUUCU  AUAACUAGUAAUAAU UGAUAGAUUUGACU   AC UACUUCAUUUU UU   U   |||| ||||||||||| ||| |||||  ||||  ||| ||| ||||   ||||||  ||||||||||||||| ||||||||||||||   || ||||||||||| ||   CAAU GUUACUUAGGU AUU AUAGU  AACU  AAG ACA AUAC   AAAAGA  UAUUGAUCAUUAUUA AUUAUCUAAACUGA   UG AUGAAGUAAGA AA   U UU    C           U   U     CA    -A   A   A    GAA      UC               U              UUA  U           A  CCG |
Stem-loop sequence | GUUGACAAUGAAUCCAUUAAUUAUCAAUUGAACUUCCUGUAUAUGAGUUUUCUCCAUAACUAGUAAUAAUUUGAUAGAUUUGACUUGACUACUUCAUUUUAUUAUCUUGCCAAAAGAAUGAAGUAUGUAUUAGUCAAAUCUAUUAUAUUAUUACUAGUUAUCUAGAAAAAAGCAUAAACAAGAAAUCAAACUGAUAUUUAUUGGAUUCAUUGCUAACUU |