ncRNA ID | novel_ath_miR407 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:12092622-12092860 [+] |
Reference genome | TAIR10 |
Source | SRR2145249 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUACAAAGGAUUUUAAAGGGCUU - 23 |
Stem-loop(if miRNA) |
--      AG           GC        -        A  U         AUUUUUAAA       A   U     -  A      AC     A      -              AUUCAAAC   UUACAA  GAUUUUAAAGG  UUUUAAAG AUUUACAA GG UUUUAAAAG         UGGUUUA AAG AUUUG AA AGAUUU  AAAGG UUUUAA AGAAUUUACAAGGG        A   ||||||  |||||||||||  |||||||| |||||||| || |||||||||         ||||||| ||| ||||| || ||||||  ||||| |||||| ||||||||||||||        C   AAUGUU  CUAAAAUUUUC  AAAAUUUU UAAAUGUU CC AAAAUUUUC         ACCAAAU UUC UAAAU UU UCUAAA  UUUCC AAAAUU UUUUAAAUGUUCUC        U UA      CU           AC        A        C  U         ---------       G   -     A  C      AU     -      A              AAAAAUUU |
Stem-loop sequence | UUACAAAGGAUUUUAAAGGGCUUUUAAAGAUUUACAAAGGUUUUUAAAAGAUUUUUAAAUGGUUUAAAAGUAUUUGAAAAGAUUUACAAAGGAUUUUAAAGAAUUUACAAGGGAUUCAAACACUUUUAAAAACUCUUGUAAAUUUUAUUAAAACCUUUUAAAAUCUCUUAUAAAUCUUGUAAACCACUUUUAAAAUCCCUUGUAAAUAUUUUAAAACACUUUUAAAAUCUCUUGUAAAU |