Search result

BaseInfo

ncRNA ID novel_ath_miR407
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:12092622-12092860 [+]
Reference genome TAIR10
Source SRR2145249
Length 23
Mature sequence(if miRNA) 1 - UUACAAAGGAUUUUAAAGGGCUU - 23
Stem-loop(if miRNA) --      AG           GC        -        A  U         AUUUUUAAA       A   U     -  A      AC     A      -              AUUCAAAC
  UUACAA  GAUUUUAAAGG  UUUUAAAG AUUUACAA GG UUUUAAAAG         UGGUUUA AAG AUUUG AA AGAUUU  AAAGG UUUUAA AGAAUUUACAAGGG        A
  ||||||  |||||||||||  |||||||| |||||||| || |||||||||         ||||||| ||| ||||| || ||||||  ||||| |||||| ||||||||||||||        C
  AAUGUU  CUAAAAUUUUC  AAAAUUUU UAAAUGUU CC AAAAUUUUC         ACCAAAU UUC UAAAU UU UCUAAA  UUUCC AAAAUU UUUUAAAUGUUCUC        U
UA      CU           AC        A        C  U         ---------       G   -     A  C      AU     -      A              AAAAAUUU
Stem-loop sequence UUACAAAGGAUUUUAAAGGGCUUUUAAAGAUUUACAAAGGUUUUUAAAAGAUUUUUAAAUGGUUUAAAAGUAUUUGAAAAGAUUUACAAAGGAUUUUAAAGAAUUUACAAGGGAUUCAAACACUUUUAAAAACUCUUGUAAAUUUUAUUAAAACCUUUUAAAAUCUCUUAUAAAUCUUGUAAACCACUUUUAAAAUCCCUUGUAAAUAUUUUAAAACACUUUUAAAAUCUCUUGUAAAU