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BaseInfo

ncRNA ID	novel_ath_miR400
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr4:4902996-4903064 [+]
Reference genome	TAIR10
Source	SRR2145249;SRR3048747
Length	24
Mature sequence(if miRNA)	46 - CGGAAUGAAGAAGGCUUUGAAGCU - 69
Stem-loop(if miRNA)	----CU            UC    UU UG     G G       GGAGUCUUCUUU  UUCC  G  CUCGA U U       ||||||||||||  ||||  |  ||||| |       UUUCGGAAGAAG  AAGG  C  GAGUU G C UCGAAG            -U    -- GU     G U
Stem-loop sequence	CUGGAGUCUUCUUUUCUUCCUUGUGCUCGAGUGUCUGGUUGAGUGCGGAAUGAAGAAGGCUUUGAAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183042.1	ncRNA:24   UCGAAGUUUCGGAAGAAGUAAGGC   1   |||||||=|||||||||||||||| targets:1794   AGCUUCAGAGCCUUCUUCAUUCCG   1817 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:24   UCGAAGUUUCGGAAGAAGUAAGGC   1   |||||||=|||||||||||||||| targets:985   AGCUUCAGAGCCUUCUUCAUUCCG   1008 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183194.1	ncRNA:24   UCGAAGUUUCGGAAGAAGUAAGGC   1   |||||||=||||||||||||||=| targets:634   AGCUUCAGAGCCUUCUUCAUUCUG   657 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget