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BaseInfo

ncRNA ID novel_ath_miR392
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:27022138-27022231 [-]
Reference genome TAIR10
Source ERR1337927;ERR1337929;ERR1337930;ERR1337931
Length 21
Mature sequence(if miRNA) 1 - UUUGUGUAUUCUAACGACGUU - 21
Stem-loop(if miRNA) --       UGU                       -----------     A
  CGUCGUU   AUACACAAAAGUGAAACGGCGUC           AUGUG G
  |||||||   |||||||||||||||||||||||           ||||| U
  GCAGCAA   UAUGUGUUUUCGCUUUGUCGCAG           UACGC A
UU       UCU                       CAAAUAAAUAU     G
Stem-loop sequence CGUCGUUUGUAUACACAAAAGUGAAACGGCGUCAUGUGAGUAGCGCAUUAUAAAUAAACGACGCUGUUUCGCUUUUGUGUAUUCUAACGACGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_105842.3
ncRNA:21   UUGCAGCAAUCUUAUGUGUUU   1
  |||||||||||||||||||||
targets:3   AACGUCGUUAGAAUACACAAA   23

0.0 Arabidopsis thaliana transducin family protein / WD-40 repeat family protein mRNA transducin family protein / WD-40 repeat family protein(AT1G71840) coding protein psRNATarget