ncRNA ID | novel_ath_miR384 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:3020-3185 [+] |
Reference genome | TAIR10 |
Source | SRR2135661 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GAUGGGAGUCCGGCUGUUCG - 20 |
Stem-loop(if miRNA) |
--     --       -   GUUCG       GC    G    UGA  GAAAUGUGAACCCUUGUCUCGCCUAGGUUGGAUGGGCGU   GAUGG  GAGUCCG GCU     AAAGCCG  CAAG GUGA   AC                                       G   |||||  ||||||| |||     |||||||  |||| ||||   ||   CUGCC  CUUAGGU CGG     UUUCGGC  GUUC CGCU   UG                                       C UU     UG       U   -----       AU    G    CUA  GAAGCCCUGUCGGAUCCGCCUAGGUACGAAAGGUUGCUU |
Stem-loop sequence | GAUGGGAGUCCGGCUGUUCGAAAGCCGGCCAAGGGUGAUGAACGAAAUGUGAACCCUUGUCUCGCCUAGGUUGGAUGGGCGUGCUUCGUUGGAAAGCAUGGAUCCGCCUAGGCUGUCCCGAAGGUAUCUCGCGCUUGUACGGCUUUGGCUUGGAUUCGUCCGUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183325.1 |
|
0.0 | Arabidopsis thaliana clone asmbl_5566 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
NM_001203076.2 |
|
0.0 | Arabidopsis thaliana hypothetical protein mRNA | hypothetical protein(AT3G41762) | coding protein | psRNATarget |