Search result

BaseInfo

ncRNA ID novel_ath_miR382
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:3804104-3804154 [-]
Reference genome TAIR10
Source SRR2135661
Length 23
Mature sequence(if miRNA) 1 - UAGGGUUUAGAGUUUAGGGUAUA - 23
Stem-loop(if miRNA) --                      A
  UACCCUAAACUCUAAACUCUGA G
  |||||||||||||||||||||| G
  AUGGGAUUUGAGAUUUGGGAUU G
AU                      U
Stem-loop sequence UACCCUAAACUCUAAACUCUGAAGGGUUUAGGGUUUAGAGUUUAGGGUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_103829.3
ncRNA:23   AUAUGGGAUUUGAGAUUUGGGAU   1
  *|*|*=||||||||||||||||*
targets:1215   GAGAGUCUAAACUCUAAACCCUU   1237

3.0 Arabidopsis thaliana 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein mRNA 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein(AT1G49390) coding protein psRNATarget
NM_001333381.1
ncRNA:23   AUAUGGGAUUUGAGAUUUGGGAU   1
  *|*|*=||||||||||||||||*
targets:1288   GAGAGUCUAAACUCUAAACCCUU   1310

3.0 Arabidopsis thaliana 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein mRNA 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein(AT1G49390) coding protein psRNATarget