ncRNA ID | ath-miRf10473-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - UACUCGACCUCUGGGUUGAGUG - NA |
Stem-loop(if miRNA) |
  UG   A         UC U        -      GU    UUGUGAUGUCUUCUACUCGACC GA  AAG CGCUCGACU  G GGUCGAGU GUUGAG  GAAG                      U ||  ||| |||||||||  | |||||||| ||||||  ||||                      G CU  UUU GUGAGUUGG  C CCAGCUCA CCUCGA  GUUC                      G   GU   G         GU U        U      -A    UAGAGUUCUCUGGUGAGCUUGG |
Stem-loop sequence | GAUGAAGACGCUCGACUUCGUGGUCGAGUGUUGAGGUGAAGUUGUGAUGUCUUCUACUCGACCUGGGGUUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUUGAGUGGUUUUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY227642.1 |
|
1.0 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
AY227642.1 |
|
2.5 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EF183194.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence | NA | coding protein | psRNATarget |