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BaseInfo

ncRNA ID ath-miRf10473-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UACUCGACCUCUGGGUUGAGUG - NA
Stem-loop(if miRNA)   UG   A         UC U        -      GU    UUGUGAUGUCUUCUACUCGACC
GA  AAG CGCUCGACU  G GGUCGAGU GUUGAG  GAAG                      U
||  ||| |||||||||  | |||||||| ||||||  ||||                      G
CU  UUU GUGAGUUGG  C CCAGCUCA CCUCGA  GUUC                      G
  GU   G         GU U        U      -A    UAGAGUUCUCUGGUGAGCUUGG
Stem-loop sequence GAUGAAGACGCUCGACUUCGUGGUCGAGUGUUGAGGUGAAGUUGUGAUGUCUUCUACUCGACCUGGGGUUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUUGAGUGGUUUUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:22   GUGAGUUGGGUCUCCAGCUCAU   1
  |||||=||||||||||||||||
targets:764   CACUCGACCCAGAGGUCGAGUA   785

1.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
AY227642.1
ncRNA:22   GUGAGUUGGGUCUCCAGCUCAU   1
  |||||*|||=||||||||||||
targets:927   CACUCUACCUAGAGGUCGAGUA   948

2.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183194.1
ncRNA:22   GUGAGUUGGGUCUCCAGCUCAU   1
  |||||*|||*||||||||||||
targets:576   CACUCUACCAAGAGGUCGAGUA   597

2.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget