ncRNA ID | novel_ath_miR362 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:17448930-17449058 [+] |
Reference genome | TAIR10 |
Source | ERR1337926 |
Length | 21 |
Mature sequence(if miRNA) | 109 - AUGAUUUUUAAACCUUUGUAA - 129 |
Stem-loop(if miRNA) |
--      UC        -   A       A    AA      C       C  -       UCAUU   AUAAAG  UUUAAAAA CAU UGUAAAU CUUU  AAAUCC UUUUAAA CU UUGUGAA     U   ||||||  |||||||| ||| ||||||| ||||  |||||| ||||||| || |||||||     U   UGUUUC  AAAUUUUU GUA ACAUUUA GGAA  UUUAGG AAAAUUU GA AACAUUU     A AA      -C        A   -       -    CA      -       U  U       UCCAA |
Stem-loop sequence | AUAAAGUCUUUAAAAACAUAUGUAAAUACUUUAAAAAUCCCUUUUAAACCUUUGUGAAUCAUUUUAAACCUUUUACAAUAGUUUUAAAAGGAUUUACAAGGAUUUACAAUGAUUUUUAAACCUUUGUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_118953.2 |
|
3.0 | Arabidopsis thaliana diacylglycerol kinase 6 (DGK6), partial mRNA | diacylglycerol kinase 6(DGK6) | coding protein | psRNATarget |