Search result

BaseInfo

ncRNA ID novel_ath_miR362
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:17448930-17449058 [+]
Reference genome TAIR10
Source ERR1337926
Length 21
Mature sequence(if miRNA) 109 - AUGAUUUUUAAACCUUUGUAA - 129
Stem-loop(if miRNA) --      UC        -   A       A    AA      C       C  -       UCAUU
  AUAAAG  UUUAAAAA CAU UGUAAAU CUUU  AAAUCC UUUUAAA CU UUGUGAA     U
  ||||||  |||||||| ||| ||||||| ||||  |||||| ||||||| || |||||||     U
  UGUUUC  AAAUUUUU GUA ACAUUUA GGAA  UUUAGG AAAAUUU GA AACAUUU     A
AA      -C        A   -       -    CA      -       U  U       UCCAA
Stem-loop sequence AUAAAGUCUUUAAAAACAUAUGUAAAUACUUUAAAAAUCCCUUUUAAACCUUUGUGAAUCAUUUUAAACCUUUUACAAUAGUUUUAAAAGGAUUUACAAGGAUUUACAAUGAUUUUUAAACCUUUGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_118953.2
ncRNA:21   AAUGUUUCCAAAUUUUUAGUA   1
  **=*||||||||||||||||*
targets:769   CCGGAAAGGUUUAAAAAUCAG   789

3.0 Arabidopsis thaliana diacylglycerol kinase 6 (DGK6), partial mRNA diacylglycerol kinase 6(DGK6) coding protein psRNATarget