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BaseInfo

ncRNA ID novel_ath_miR361
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:29470018-29470098 [-]
Reference genome TAIR10
Source SRR2135659
Length 24
Mature sequence(if miRNA) 58 - AAUUUUGUGUGAACUAGUUGGAUA - 81
Stem-loop(if miRNA) ---A   U           -       --AC      CAAAC
    AUU UGUGUGAACUA GUUGGAU    AACAUC     C
    ||| ||||||||||| |||||||    ||||||     C
    UAA ACAUAUUUGGU CAACUUG    UUGUGG     C
AAUA   U           A       GAUC      AUAAU
Stem-loop sequence AAUUUUGUGUGAACUAGUUGGAUACAACAUCCAAACCCCUAAUAGGUGUUCUAGGUUCAACAUGGUUUAUACAUAAUAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_106350.3
ncRNA:24   AUAGGUUGAUCAAGUGUGUUUUAA   1
  |=|||||=|||||=||||||||||
targets:2339   UGUCCAAUUAGUUUACACAAAAUU   2362

2.5 Arabidopsis thaliana ACT domain repeat 3 (ACR3), mRNA ACT domain repeat 3(ACR3) coding protein psRNATarget
NM_179565.2
ncRNA:24   AUAGGUUGAUCAAGUGUGUUUUAA   1
  |=|||||=|||||=||||||||||
targets:2450   UGUCCAAUUAGUUUACACAAAAUU   2473

2.5 Arabidopsis thaliana ACT domain repeat 3 (ACR3), mRNA ACT domain repeat 3(ACR3) coding protein psRNATarget
NM_179566.2
ncRNA:24   AUAGGUUGAUCAAGUGUGUUUUAA   1
  |=|||||=|||||=||||||||||
targets:2546   UGUCCAAUUAGUUUACACAAAAUU   2569

2.5 Arabidopsis thaliana ACT domain repeat 3 (ACR3), mRNA ACT domain repeat 3(ACR3) coding protein psRNATarget