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BaseInfo

ncRNA ID novel_ath_miR358
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:15964751-15964799 [-]
Reference genome TAIR10
Source SRR2135659
Length 20
Mature sequence(if miRNA) 1 - AUACUCAAAAGAAAAAAUGU - 20
Stem-loop(if miRNA) --U             A  A   G
   UUUUUUUUUUUGA UA AAU U
   ||||||||||||| || ||| U
   AAAAAAGAAAACU AU UUA A
UGU             C  A   A
Stem-loop sequence UUUUUUUUUUUUGAAUAAAAUGUUAAAUUAUACUCAAAAGAAAAAAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY630766.1
ncRNA:20   UG-UAAAAAAGAAAACUCAUA   1
  ||-||||||||||||||||||
targets:1048   ACUAUUUUUUCUUUUGAGUAU   1068

2.0 Arabidopsis thaliana hypothetical protein (At1G54955) mRNA, complete cds NA coding protein psRNATarget
NM_116592.2
ncRNA:20   UGUAAAAAAGAAAACUCAUA   1
  ||*||||||=||||||||||
targets:605   ACCUUUUUUUUUUUGAGUAU   624

2.5 Arabidopsis thaliana Uncharacterized protein family (UPF0497) mRNA Uncharacterized protein family (UPF0497)(AT4G03540) coding protein psRNATarget