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BaseInfo

ncRNA ID	novel_ath_miR357
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr4:154425-154479 [-]
Reference genome	TAIR10
Source	SRR2135659
Length	24
Mature sequence(if miRNA)	1 - GGGUAAAUAUCCAGAUUUUCGGGU - 24
Stem-loop(if miRNA)	--     UU        AA           CCGAA  UUUGGGUA  UAUCCAGAU   |||||  ||||||||  ||||||||U   GGCUU  AGACCUAU  AUGGGUUUU UG     UU        AA
Stem-loop sequence	CCGAAUUUUUGGGUAAAUAUCCAGAUUUUUUGGGUAAAUAUCCAGAUUUUCGGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT005012.1	ncRNA:24   UGGG--CUUUUAGACCUAUAAAUGGG   1   ==|=--|||||*|||||*|||||||| targets:1433   GUCUUGGAAAAGCUGGACAUUUACCC   1458 Target Full Sequence	2.5	Arabidopsis thaliana clone U50601 unknown protein (At1g18900) mRNA, complete cds	NA	coding protein	psRNATarget
AK117464.1	ncRNA:24   UGGG--CUUUUAGACCUAUAAAUGGG   1   ==|=--|||||*|||||*|||||||| targets:1632   GUCUUGGAAAAGCUGGACAUUUACCC   1657 Target Full Sequence	2.5	Arabidopsis thaliana At1g18900 mRNA for unknown protein, complete cds, clone: RAFL17-06-O22	NA	coding protein	psRNATarget
NM_101747.3	ncRNA:24   UGGG--CUUUUAGACCUAUAAAUGGG   1   ==|=--|||||*|||||*|||||||| targets:1632   GUCUUGGAAAAGCUGGACAUUUACCC   1657 Target Full Sequence	2.5	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein mRNA	Pentatricopeptide repeat (PPR) superfamily protein(AT1G18900)	coding protein	psRNATarget
NM_001198101.1	ncRNA:24   UGGG--CUUUUAGACCUAUAAAUGGG   1   ==|=--|||||*|||||*|||||||| targets:1855   GUCUUGGAAAAGCUGGACAUUUACCC   1880 Target Full Sequence	2.5	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein mRNA	Pentatricopeptide repeat (PPR) superfamily protein(AT1G18900)	coding protein	psRNATarget
NM_202131.1	ncRNA:24   UGGG--CUUUUAGACCUAUAAAUGGG   1   ==|=--|||||*|||||*|||||||| targets:1793   GUCUUGGAAAAGCUGGACAUUUACCC   1818 Target Full Sequence	2.5	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein mRNA	Pentatricopeptide repeat (PPR) superfamily protein(AT1G18900)	coding protein	psRNATarget
NM_001332378.1	ncRNA:24   UGGG--CUUUUAGACCUAUAAAUGGG   1   ==|=--|||||*|||||*|||||||| targets:2094   GUCUUGGAAAAGCUGGACAUUUACCC   2119 Target Full Sequence	2.5	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein mRNA	Pentatricopeptide repeat (PPR) superfamily protein(AT1G18900)	coding protein	psRNATarget