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BaseInfo

ncRNA ID ath-miRf10471-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UCACUCGACCACGAGGUCGAGUGU - NA
Stem-loop(if miRNA)    U         C C         A  ---  ACAUCA
AGA CACUCGACC C UGGUCGAGU GA   GG      C
||| ||||||||| | ||||||||| ||   ||
UCU GUGAGCUGG G ACCAGCUCA CU   CC      U
   -         A C         -  ACA  ACUUCA
Stem-loop sequence AGAUCACUCGACCCCCUGGUCGAGUAGAGGACAUCACUACUUCACCACAUCACUCGACCACGAGGUCGAGUGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183005.1
ncRNA:24   UGUGAGCUGGAGCACCAGCUCACU   1
  =||||||||||||*||||||||||
targets:1864   GCACUCGACCUCGAGGUCGAGUGA   1887

1.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget
NM_103391.1
ncRNA:24   UGUGAGCUGGAGCACCAGCUCACU   1
  *|||||||||*||||||||||||*
targets:1209   CCACUCGACCCCGUGGUCGAGUGU   1232

2.0 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
EF183005.1
ncRNA:24   UGUGAGCUGGAGCACCAGCUCACU   1
  *=||||||||||*||||||||||=
targets:2014   CUACUCGACCUCUUGGUCGAGUGG   2037

2.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget