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BaseInfo

ncRNA ID novel_ath_miR352
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:11350136-11350255 [-]
Reference genome TAIR10
Source SRR2135659
Length 24
Mature sequence(if miRNA) 97 - AGUGGACACUUGGUAUGAUUUCGG - 120
Stem-loop(if miRNA) --                                          C    C  U  AACAC
  AGUGGACACUUGGUAUGAUUUCGGUUGUUAUGUGUCCUUUUG UAUG UU UG     A
  |||||||||||||||||||||||||||||||||||||||||| |||| || ||     G
  UCACCUGUGAACCAUACUAAAGCCAACAAUACACAGGAAAAC AUAC AA AC     C
GA                                          A    -  U  AAGAU
Stem-loop sequence AGUGGACACUUGGUAUGAUUUCGGUUGUUAUGUGUCCUUUUGCUAUGCUUUUGAACACAGCUAGAACAUAACAUAACAAAAGGACACAUAACAACCGAAAUCAUACCAAGUGUCCACUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001339025.1
ncRNA:24   GGCUUUAGUAUGGUUCACAGGUGA   1
  ||||||||||||||||||||||||
targets:946   CCGAAAUCAUACCAAGUGUCCACU   969

0.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29455) coding protein psRNATarget