ncRNA ID | novel_ath_miR352 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:11350136-11350255 [-] |
Reference genome | TAIR10 |
Source | SRR2135659 |
Length | 24 |
Mature sequence(if miRNA) | 97 - AGUGGACACUUGGUAUGAUUUCGG - 120 |
Stem-loop(if miRNA) |
--                                          C    C  U  AACAC   AGUGGACACUUGGUAUGAUUUCGGUUGUUAUGUGUCCUUUUG UAUG UU UG     A   |||||||||||||||||||||||||||||||||||||||||| |||| || ||     G   UCACCUGUGAACCAUACUAAAGCCAACAAUACACAGGAAAAC AUAC AA AC     C GA                                          A    -  U  AAGAU |
Stem-loop sequence | AGUGGACACUUGGUAUGAUUUCGGUUGUUAUGUGUCCUUUUGCUAUGCUUUUGAACACAGCUAGAACAUAACAUAACAAAAGGACACAUAACAACCGAAAUCAUACCAAGUGUCCACUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001339025.1 |
|
0.0 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT3G29455) | coding protein | psRNATarget |