ncRNA ID | novel_ath_miR333 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:5818469-5818634 [+] |
Reference genome | TAIR10 |
Source | SRR2135658 |
Length | 24 |
Mature sequence(if miRNA) | 143 - AGGGAUUUUGGAGGAAGAAAUGGU - 166 |
Stem-loop(if miRNA) |
--         -- UG    UU  -    UU -UUUUG    GG -GU  -   GAAAGAGAUUAUAUUGGUGAAGGGAGAGGUUU   UAUUUUUUC  U  GGGU  CU ACUU  C      GAAU  G   UA UGA                                A   |||||||||  |  ||||  || ||||  |      ||||  |   || |||   GUAAAGAAG  G  UUUA  GA UGGA  G      UUUG  U   UU UUU                                A UG         GA GU    GG  A    GG UUUUGA    UU GUG  G   CGUGGGAUUUAAAUUUUUGGACAAAAGAAUUU |
Stem-loop sequence | UAUUUUUUCUUGGGGUUUCUACUUUUCUUUUGGAAUGGGGUUAUGAGAAAGAGAUUAUAUUGGUGAAGGGAGAGGUUUAAUUUAAGAAAACAGGUUUUUAAAUUUAGGGUGCUUUGUUGUGUUUGUUUAGUUUUGGGAGGUAAGGGAUUUUGGAGGAAGAAAUGGU |