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BaseInfo

ncRNA ID novel_ath_miR331
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:12991711-12991759 [+]
Reference genome TAIR10
Source SRR2135658
Length 24
Mature sequence(if miRNA) 1 - UCGGAUUGAUUGAUAAUGAGGCAU - 24
Stem-loop(if miRNA) --       GA    U    -A   
  UCGGAUU  UUGA AAUG  GGCA
  |||||||  |||| ||||  |||U
  AGCUUAA  AAUU UUGC  UCGG
CU       -G    U    AA   
Stem-loop sequence UCGGAUUGAUUGAUAAUGAGGCAUGGCUAACGUUUUUAAGAAUUCGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183005.1
ncRNA:24   UACGGAGUAAU-AGUUAGUUAGGCU   1
  |||||||||||-|||||||||||||
targets:2417   AUGCCUCAUUAAUCAAUCAAUCCGA   2441

3.0 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget