ncRNA ID | novel_ath_miR317 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:16014490-16014665 [+] |
Reference genome | TAIR10 |
Source | SRR2135657;SRR2135659 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACAAGGGAUUUUAAAAGGGUUUAA - 24 |
Stem-loop(if miRNA) |
--                  G       U            A   G    A     A     A    AAAAGAU  A    --     U   ACAAGGGAUUUUAAAAGG UUUAAAA AAUUUAUAAGAG UUU UAAA GGUUU AAAGU UUUU       GU CUUG  AGUUU U   |||||||||||||||||| ||||||| |||||||||||| ||| |||| ||||| ||||| ||||       || ||||  ||||| A   UGUUCCCUAAAAUUUUCC AAAUUUU UUAAAUGUUCUC AAA AUUU CCAAA UUUCA AGAA       UA GAAC  UUAGA A AA                  A       U            -   A    C     A     C    GAACAUU  A    AU     A |
Stem-loop sequence | ACAAGGGAUUUUAAAAGGGUUUAAAAUAAUUUAUAAGAGAUUUGUAAAAGGUUUAAAAGUAUUUUAAAAGAUGUACUUGAGUUUUUAAAAGAUUUACAAGAAUUUACAAGAAGACACUUUAAAACCCUUUAAAAACUCUUGUAAAUUUUUUUAAAACCUUUUAAAAUCCCUUGUAA |