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BaseInfo

ncRNA ID novel_ath_miR317
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:16014490-16014665 [+]
Reference genome TAIR10
Source SRR2135657;SRR2135659
Length 24
Mature sequence(if miRNA) 1 - ACAAGGGAUUUUAAAAGGGUUUAA - 24
Stem-loop(if miRNA) --                  G       U            A   G    A     A     A    AAAAGAU  A    --     U
  ACAAGGGAUUUUAAAAGG UUUAAAA AAUUUAUAAGAG UUU UAAA GGUUU AAAGU UUUU       GU CUUG  AGUUU U
  |||||||||||||||||| ||||||| |||||||||||| ||| |||| ||||| ||||| ||||       || ||||  ||||| A
  UGUUCCCUAAAAUUUUCC AAAUUUU UUAAAUGUUCUC AAA AUUU CCAAA UUUCA AGAA       UA GAAC  UUAGA A
AA                  A       U            -   A    C     A     C    GAACAUU  A    AU     A
Stem-loop sequence ACAAGGGAUUUUAAAAGGGUUUAAAAUAAUUUAUAAGAGAUUUGUAAAAGGUUUAAAAGUAUUUUAAAAGAUGUACUUGAGUUUUUAAAAGAUUUACAAGAAUUUACAAGAAGACACUUUAAAACCCUUUAAAAACUCUUGUAAAUUUUUUUAAAACCUUUUAAAAUCCCUUGUAA