ncRNA ID | novel_ath_miR313 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:8204490-8204647 [+] |
Reference genome | TAIR10 |
Source | SRR2135657;SRR2135661 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGGGGGGAUUGACACAAAUGGCA - 24 |
Stem-loop(if miRNA) |
--AUG          C        CAC                 --------CCAA       -----       UU   AACUUC      GGGGGAUUGA ACAAAUGG   UAAAAAACUUUAUUAUU            AAAUGAU     ACUUUGU  UGA      C      |||||||||| ||||||||   |||||||||||||||||            |||||||     |||||||  |||      UCCCUUAACU UGUUUAUC   AUUUUUUGAAAUAAUAA            UUUACUA     UGAAAUA  ACU      A AUAAA          A        AUU                 AUUAAUUAUAUA       AUUUU       -U   AUAAAA |
Stem-loop sequence | AUGGGGGGAUUGACACAAAUGGCACUAAAAAACUUUAUUAUUCCAAAAAUGAUACUUUGUUUUGAAACUUCCAAAAAUAUCAUAUAAAGUUUUUAAUCAUUUAUAUAUUAAUUAAAUAAUAAAGUUUUUUAUUACUAUUUGUAUCAAUUCCCUAAAUA |