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BaseInfo

ncRNA ID novel_ath_miR313
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:8204490-8204647 [+]
Reference genome TAIR10
Source SRR2135657;SRR2135661
Length 24
Mature sequence(if miRNA) 1 - AUGGGGGGAUUGACACAAAUGGCA - 24
Stem-loop(if miRNA) --AUG          C        CAC                 --------CCAA       -----       UU   AACUUC
     GGGGGAUUGA ACAAAUGG   UAAAAAACUUUAUUAUU            AAAUGAU     ACUUUGU  UGA      C
     |||||||||| ||||||||   |||||||||||||||||            |||||||     |||||||  |||
     UCCCUUAACU UGUUUAUC   AUUUUUUGAAAUAAUAA            UUUACUA     UGAAAUA  ACU      A
AUAAA          A        AUU                 AUUAAUUAUAUA       AUUUU       -U   AUAAAA
Stem-loop sequence AUGGGGGGAUUGACACAAAUGGCACUAAAAAACUUUAUUAUUCCAAAAAUGAUACUUUGUUUUGAAACUUCCAAAAAUAUCAUAUAAAGUUUUUAAUCAUUUAUAUAUUAAUUAAAUAAUAAAGUUUUUUAUUACUAUUUGUAUCAAUUCCCUAAAUA