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BaseInfo

ncRNA ID novel_ath_miR306
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:11350141-11350260 [+]
Reference genome TAIR10
Source SRR2135657;SRR2135658;SRR2135659
Length 24
Mature sequence(if miRNA) 1 - AGUGGACACUUGGUAUGAUUUCGG - 24
Stem-loop(if miRNA) --                                                 -A  UU UA
  AGUGGACACUUGGUAUGAUUUCGGUUGUUAUGUGUCCUUUUGUUAUGUU  UG  C  G
  |||||||||||||||||||||||||||||||||||||||||||||||||  ||  |  C
  UCACCUGUGAACCAUACUAAAGCCAACAAUACACAGGAAAACGAUACGA  AC  G  U
GA                                                 AA  UU UG
Stem-loop sequence AGUGGACACUUGGUAUGAUUUCGGUUGUUAUGUGUCCUUUUGUUAUGUUAUGUUCUAGCUGUGUUCAAAAGCAUAGCAAAAGGACACAUAACAACCGAAAUCAUACCAAGUGUCCACUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001339025.1
ncRNA:24   GGCUUUAGUAUGGUUCACAGGUGA   1
  ||||||||||||||||||||||||
targets:946   CCGAAAUCAUACCAAGUGUCCACU   969

0.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29455) coding protein psRNATarget