ncRNA ID | novel_ath_miR306 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:11350141-11350260 [+] |
Reference genome | TAIR10 |
Source | SRR2135657;SRR2135658;SRR2135659 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUGGACACUUGGUAUGAUUUCGG - 24 |
Stem-loop(if miRNA) |
--                                                 -A  UU UA   AGUGGACACUUGGUAUGAUUUCGGUUGUUAUGUGUCCUUUUGUUAUGUU  UG  C  G   |||||||||||||||||||||||||||||||||||||||||||||||||  ||  |  C   UCACCUGUGAACCAUACUAAAGCCAACAAUACACAGGAAAACGAUACGA  AC  G  U GA                                                 AA  UU UG |
Stem-loop sequence | AGUGGACACUUGGUAUGAUUUCGGUUGUUAUGUGUCCUUUUGUUAUGUUAUGUUCUAGCUGUGUUCAAAAGCAUAGCAAAAGGACACAUAACAACCGAAAUCAUACCAAGUGUCCACUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001339025.1 |
|
0.0 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT3G29455) | coding protein | psRNATarget |