ncRNA ID | novel_ath_miR301 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:13463928-13463988 [-] |
Reference genome | TAIR10 |
Source | SRR2135657 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGUGAGUGUGGUUGGUAUUUUGA - 24 |
Stem-loop(if miRNA) |
AAGUAU      -UUU    UG  CU  UC       GUAUUA    UAUU  UU  GG  A       ||||||    ||||  ||  ||  U       UAUGGU    GUGA  GA  CC  A -AGUUU      UGGU    GU  AU  UA |
Stem-loop sequence | AAGUAUGUAUUAUUUUAUUUGUUCUGGUCAUAAUCCUAAGUGAGUGUGGUUGGUAUUUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_112500.3 |
|
2.5 | Arabidopsis thaliana AAA-type ATPase family protein (EMB2083), mRNA | AAA-type ATPase family protein(EMB2083) | coding protein | psRNATarget |