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BaseInfo

ncRNA ID novel_ath_miR301
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:13463928-13463988 [-]
Reference genome TAIR10
Source SRR2135657
Length 24
Mature sequence(if miRNA) 1 - AAGUGAGUGUGGUUGGUAUUUUGA - 24
Stem-loop(if miRNA) AAGUAU      -UUU    UG  CU  UC
      GUAUUA    UAUU  UU  GG  A
      ||||||    ||||  ||  ||  U
      UAUGGU    GUGA  GA  CC  A
-AGUUU      UGGU    GU  AU  UA
Stem-loop sequence AAGUAUGUAUUAUUUUAUUUGUUCUGGUCAUAAUCCUAAGUGAGUGUGGUUGGUAUUUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_112500.3
ncRNA:24   AGUUUUAUGGUUGGUGUGAGUGAA   1
  ||=*||||||||=||||||||||*
targets:334   UCGCAAUACCAAUCACACUCACUA   357

2.5 Arabidopsis thaliana AAA-type ATPase family protein (EMB2083), mRNA AAA-type ATPase family protein(EMB2083) coding protein psRNATarget