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BaseInfo

ncRNA ID novel_ath_miR299
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:4196472-4196686 [-]
Reference genome TAIR10
Source SRR2135656
Length 24
Mature sequence(if miRNA) 192 - AGGGACAACAAUGGAAAUGGAGAC - 215
Stem-loop(if miRNA) --      -  C           A  ---CA      A     A     AGAAAA   G     U A  --AAUUCAC      AU  A  CGAGA              A U
  AGGGAC AA AAUGGAAAUGG GA     UUUGGG GUAAA UCUAA      GAA CUAAA G CG         UUUCAG  CC GU     GUGUCGAUCGGCAC C C
  |||||| || ||||||||||| ||     |||||| ||||| |||||      ||| ||||| | ||         ||||||  || ||     |||||||||||||| |
  UCUCUG UU UUACUUUUAUC CU     AGACCC CGUUU AGGUU      UUU GAUUU C GC         AGAGUC  GG CG     CACAGUUAGUUGUG G U
UG      A  A           C  UCAGG      -     -     AAGAAG   G     U -  AAUACCUCA      CC  -  UUGAC              - U
Stem-loop sequence AGGGACAACAAUGGAAAUGGAGACAUUUGGGAGUAAAAUCUAAAGAAAAGAAGCUAAAUGACGAAUUCACUUUCAGAUCCAGUCGAGAGUGUCGAUCGGCACACUCUUGGUGUUGAUUGACACCAGUUGCGGCCCUGAGAACUCCAUAACGCUUUUAGGUUUGAAGAAUUGGAUUUGCCCCAGAGGACUUCCCUAUUUUCAUUAUUAGUCUCUGU