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BaseInfo

ncRNA ID novel_ath_miR297
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:6220654-6220831 [+]
Reference genome TAIR10
Source SRR2135656
Length 18
Mature sequence(if miRNA) 161 - UUUGGAUUGAAGGGAGCU - 178
Stem-loop(if miRNA) --      GA       U       UU   ------    UG    -      G  A  C     AUC      -----         AAU     
  CUCCUU  AGUUCAA GGAGGGU  AGC      AGGG  AAGU AAAGCU CU AG UAUGG   CCAUAA     GCCUUAUCA   UCAAUA
  ||||||  ||||||| |||||||  |||      ||||  |||| |||||| || || |||||   ||||||     |||||||||   |||||U
  GAGGGA  UUAGGUU CUUCUCA  UCG      UCCC  UUCA UUUCGA GA UC AUACC   GGUAUU     UGGAAUAGU   AGUUAA
UC      AG       U       CU   GUAAUU    CA    C      G  C  U     GUA      UUUUU         ---     
Stem-loop sequence CUCCUUGAAGUUCAAUGGAGGGUUUAGCAGGGUGAAGUAAAGCUGCUAAGCUAUGGAUCCCAUAAGCCUUAUCAAAUUCAAUAUAAUUGAUGAUAAGGUUUUUUUUAUGGAUGCCAUAUCUCAGGAGCUUUCACUUACCCCUUUAAUGGCUUCACUCUUCUUUGGAUUGAAGGGAGCU