ncRNA ID | novel_ath_miR297 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:6220654-6220831 [+] |
Reference genome | TAIR10 |
Source | SRR2135656 |
Length | 18 |
Mature sequence(if miRNA) | 161 - UUUGGAUUGAAGGGAGCU - 178 |
Stem-loop(if miRNA) |
--      GA       U       UU   ------    UG    -      G  A  C     AUC      -----         AAU        CUCCUU  AGUUCAA GGAGGGU  AGC      AGGG  AAGU AAAGCU CU AG UAUGG   CCAUAA     GCCUUAUCA   UCAAUA   ||||||  ||||||| |||||||  |||      ||||  |||| |||||| || || |||||   ||||||     |||||||||   |||||U   GAGGGA  UUAGGUU CUUCUCA  UCG      UCCC  UUCA UUUCGA GA UC AUACC   GGUAUU     UGGAAUAGU   AGUUAA UC      AG       U       CU   GUAAUU    CA    C      G  C  U     GUA      UUUUU         ---      |
Stem-loop sequence | CUCCUUGAAGUUCAAUGGAGGGUUUAGCAGGGUGAAGUAAAGCUGCUAAGCUAUGGAUCCCAUAAGCCUUAUCAAAUUCAAUAUAAUUGAUGAUAAGGUUUUUUUUAUGGAUGCCAUAUCUCAGGAGCUUUCACUUACCCCUUUAAUGGCUUCACUCUUCUUUGGAUUGAAGGGAGCU |