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BaseInfo

ncRNA ID novel_ath_miR294
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:16641101-16641310 [+]
Reference genome TAIR10
Source SRR2135656
Length 24
Mature sequence(if miRNA) 1 - AGGGAACUCUAUUUUAGACGCAUU - 24
Stem-loop(if miRNA)      --             C                       C                 AA     A                 A  UGUAGAGA      U
AGGGA  ACUCUAUUUUAGA GCAUUGUGCUCCAGUGGUCACCU UAAAAUAGAGUUUCCUC  AAAUA AGGAAAAAAUAGAGAUG AU        UCUCUA U
|||||  ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||||||||| ||        ||||||
UCUCU  UGAGAUAAAAUUU UGUAACACGAGGUUACCAGUGGA AUUUUAUCUCAAAGGAG  UUUAU UCCUUUUUUAUCUCUAU UA        AGAGAU U
     AC             C                       A                 AC     C                 A  UGAAAAAC      A
Stem-loop sequence AGGGAACUCUAUUUUAGACGCAUUGUGCUCCAGUGGUCACCUCUAAAAUAGAGUUUCCUCAAAAAUAAAGGAAAAAAUAGAGAUGAAUUGUAGAGAUCUCUAUUUAUAGAGACAAAAAGUAUAUAUCUCUAUUUUUUCCUCUAUUUCAGAGGAAACUCUAUUUUAAAGGUGACCAUUGGAGCACAAUGUCUUUAAAAUAGAGUCAUCUCU