ncRNA ID | ath-miR5663-5p |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr1:18686855-18686966 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 88 - AGCUAAGGAUUUGCAUUCUCA - 108 |
Stem-loop(if miRNA) |
U                               ------AUU   GUAUAUAGUAACAU  UAUAGCUAAGGAUUUGCAUUCUCAUGAUUGA         CUA              U  |||||||||||||||||||||||||||||||         |||  AUAUCGAUUCCUAAACGUAAGAGUACUAACU         AAU              A U                               CAAAUCACA   AUCUGAAAGAAGAU |
Stem-loop sequence | UUAUAGCUAAGGAUUUGCAUUCUCAUGAUUGAAUUCUAGUAUAUAGUAACAUUAUAGAAGAAAGUCUAUAAACACUAAACUCAAUCAUGAGAAUGCAAAUCCUUAGCUAUAU |
1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |