ncRNA ID | novel_ath_miR290 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:14587676-14587730 [+] |
Reference genome | TAIR10 |
Source | SRR2135656 |
Length | 24 |
Mature sequence(if miRNA) | 32 - AUUGGGUGUGAAUGUUAUGGUGAA - 55 |
Stem-loop(if miRNA) |
--     AUU          G   UUU   CACUG   UAUUCAUAUU AGU   U   |||||   |||||||||| |||   U   GUGGU   GUAAGUGUGG UUA   U AA     AUU          G   UUU |
Stem-loop sequence | CACUGAUUUAUUCAUAUUGAGUUUUUUUUUUAUUGGGUGUGAAUGUUAUGGUGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_105115.4 |
|
2.5 | Arabidopsis thaliana AMP-dependent synthetase and ligase family protein (LACS3), mRNA | AMP-dependent synthetase and ligase family protein(LACS3) | coding protein | psRNATarget |