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BaseInfo

ncRNA ID	novel_ath_miR289
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr5:7740608-7740693 [-]
Reference genome	TAIR10
Source	SRR2135656;SRR2135660;ERR1337946;ERR1337968
Length	21
Mature sequence(if miRNA)	1 - UCGAUAAACCUCUGCAUCCAG - 21
Stem-loop(if miRNA)	--   G    C    C       A    ------C        UUU   GGA GCAG GGUU AUCGAUC AUUC       UGUGAAUA   A   ||| |||| |||| ||||||| ||||       ||||||||   CCU CGUC CCAA UAGCUAG UAAG       ACAUUUGU   U GA   A    U    A       C    AACGAAA        UUU
Stem-loop sequence	GGAGGCAGCGGUUCAUCGAUCAAUUCCUGUGAAUAUUUAUUUUUGUUUACAAAAGCAAGAAUCGAUCGAUAAACCUCUGCAUCCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AF187317.1	ncRNA:21   GACCUACGUCUCCA-AAUAGCU   1   ||||||||||||||-||||||| targets:3058   CUGGAUGCAGAGGUAUUAUCGA   3079 Target Full Sequence	3.0	Arabidopsis thaliana CAF protein (CAF) mRNA, complete cds	NA	coding protein	psRNATarget
AF292940.1	ncRNA:21   GACCUACGUCUCCA-AAUAGCU   1   ||||||||||||||-||||||| targets:3422   CUGGAUGCAGAGGUAUUAUCGA   3443 Target Full Sequence	3.0	Arabidopsis thaliana short integuments 1 (SIN1) mRNA, complete cds	NA	coding protein	psRNATarget
NM_099986.4	ncRNA:21   GACCUACGUCUCCA-AAUAGCU   1   ||||||||||||||-||||||| targets:3447   CUGGAUGCAGAGGUAUUAUCGA   3468 Target Full Sequence	3.0	Arabidopsis thaliana dicer-like 1 (DCL1), mRNA	dicer-like 1(DCL1)	coding protein	psRNATarget