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BaseInfo

ncRNA ID novel_ath_miR288
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:12495204-12495290 [-]
Reference genome TAIR10
Source SRR2135656
Length 24
Mature sequence(if miRNA) 1 - AACGAUCGAUCCCGAGCUGGCGGA - 24
Stem-loop(if miRNA) -  -                  A   AAAACUCAUCC    AG
 CC CCAGCUCGGGAUCGAUCG UCC           ACGA  U
 || |||||||||||||||||| |||           ||||  A
 GG GGUCGAGCCCUAGCUAGC AGG           UGCU  A
A  C                  A   GCAAGAUCGUC    AA
Stem-loop sequence CCCCAGCUCGGGAUCGAUCGAUCCAAAACUCAUCCACGAAGUAAAAUCGUCUGCUAGAACGGGAACGAUCGAUCCCGAGCUGGCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_113998.2
ncRNA:24   AGGCGGUCGAGCCCUAGCUAGCAA   1
  *|||||||||||||||||||||*|
targets:356   CCCGCCAGCUCGGGAUCGAUCGAU   379

1.5 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G31350) coding protein psRNATarget