ncRNA ID | novel_ath_miR288 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:12495204-12495290 [-] |
Reference genome | TAIR10 |
Source | SRR2135656 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACGAUCGAUCCCGAGCUGGCGGA - 24 |
Stem-loop(if miRNA) |
-  -                  A   AAAACUCAUCC    AG  CC CCAGCUCGGGAUCGAUCG UCC           ACGA  U  || |||||||||||||||||| |||           ||||  A  GG GGUCGAGCCCUAGCUAGC AGG           UGCU  A A  C                  A   GCAAGAUCGUC    AA |
Stem-loop sequence | CCCCAGCUCGGGAUCGAUCGAUCCAAAACUCAUCCACGAAGUAAAAUCGUCUGCUAGAACGGGAACGAUCGAUCCCGAGCUGGCGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_113998.2 |
|
1.5 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT3G31350) | coding protein | psRNATarget |