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BaseInfo

ncRNA ID novel_ath_miR286
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:3173821-3173942 [-]
Reference genome TAIR10
Source SRR2135656
Length 23
Mature sequence(if miRNA) 1 - GCGGUGGCACUUAGAUUUGGUUG - 23
Stem-loop(if miRNA) --   -U   G  A    UAUUGUUGAU       --- C  G          U  C   AAU  UGA
  GCC  AUU GA UGCC          UCGUAAU   G CU UUAAGUUAGC CU GUC   GG   U
  |||  ||| || ||||          |||||||   | || |||||||||| || |||   ||
  UGG  UAG UU ACGG          GGCGUUG   C GA AGUUCGAUUG GA CAG   CU   U
GU   UU   A  C    ---------U       UCU U  G          -  U   GGU  GAG
Stem-loop sequence GCCUAUUGGAAUGCCUAUUGUUGAUUCGUAAUGCCUGUUAAGUUAGCUCUCGUCAAUGGUGAUUGAGUCUGGGACUAGGUUAGCUUGAGAGUCUCUGUUGCGGUGGCACUUAGAUUUGGUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183005.1
ncRNA:23   GUUGGUUUAGAUUCACGGUGGCG   1
  =||||||||||||||||||||||
targets:1011   UAACCAAAUCUAAGUGCCACCGC   1033

0.0 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget