ncRNA ID | novel_ath_miR286 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:3173821-3173942 [-] |
Reference genome | TAIR10 |
Source | SRR2135656 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GCGGUGGCACUUAGAUUUGGUUG - 23 |
Stem-loop(if miRNA) |
--   -U   G  A    UAUUGUUGAU       --- C  G          U  C   AAU  UGA   GCC  AUU GA UGCC          UCGUAAU   G CU UUAAGUUAGC CU GUC   GG   U   |||  ||| || ||||          |||||||   | || |||||||||| || |||   ||   UGG  UAG UU ACGG          GGCGUUG   C GA AGUUCGAUUG GA CAG   CU   U GU   UU   A  C    ---------U       UCU U  G          -  U   GGU  GAG |
Stem-loop sequence | GCCUAUUGGAAUGCCUAUUGUUGAUUCGUAAUGCCUGUUAAGUUAGCUCUCGUCAAUGGUGAUUGAGUCUGGGACUAGGUUAGCUUGAGAGUCUCUGUUGCGGUGGCACUUAGAUUUGGUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183005.1 |
|
0.0 | Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence | NA | coding protein | psRNATarget |