ncRNA ID | novel_ath_miR279 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:15127910-15128006 [+] |
Reference genome | TAIR10 |
Source | SRR2135656 |
Length | 24 |
Mature sequence(if miRNA) | 74 - AUUAGUGUUUCUGUAGGAGAGGUU - 97 |
Stem-loop(if miRNA) |
---  A  G  -   GG    -    --   UA     AUUAU U G     A    CU CU CU UAG  ACAU AAUG  GCU  GACUU     G U GGGUG A    || || || |||  |||| ||||  |||  |||||     | | |||||    GA GA GA GUC  UGUG UUAC  CGA  UUGGG     C A UUCAC U UUG  -  G  U   UU    A    AU   --     -GGUU U G     A |
Stem-loop sequence | CUACUGCUUAGGGACAUAAUGGCUUAGACUUAUUAUGUUGGGGUGAAUACACUUGAUCUUGGGGGUUAGCUACAUUAGUGUUUCUGUAGGAGAGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK230036.1 |
|
1.5 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-60-F14 | NA | coding protein | psRNATarget |