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BaseInfo

ncRNA ID novel_ath_miR268
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:18548147-18548330 [+]
Reference genome TAIR10
Source ERR1297332
Length 24
Mature sequence(if miRNA) 161 - GUGACUAUUUUGCAAAUUAUGAAU - 184
Stem-loop(if miRNA) --                                                                            AUAUA     -A   A
  UCAUAAUUUGCAAAAUAGUCACUUUUCACUGUUUGAUUCGUACACUUGGAUUGUACAUCACUUUUAGUGUACAAAU     UAAAA  UAC C
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||  ||| A
  AGUAUUAAACGUUUUAUCAGUGAAAAGUGACAAACUAAGCAUGUGAACCUAACAUGUAGUGAAAAUCACAUGUUUA     AUUUU  AUG G
UA                                                                            ----C     AC   C
Stem-loop sequence UCAUAAUUUGCAAAAUAGUCACUUUUCACUGUUUGAUUCGUACACUUGGAUUGUACAUCACUUUUAGUGUACAAAUAUAUAUAAAAAUACACAGCGUACAUUUUACAUUUGUACACUAAAAGUGAUGUACAAUCCAAGUGUACGAAUCAAACAGUGAAAAGUGACUAUUUUGCAAAUUAUGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_105281.3
ncRNA:24   UAAGUAUUAAACGUUUUAUCAGUG   1
  |||||*||||||||||=|||||||
targets:946   AUUCAAAAUUUGCAAAGUAGUCAC   969

2.5 Arabidopsis thaliana Plant thionin mRNA Plant thionin(AT1G66100) coding protein psRNATarget