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BaseInfo

ncRNA ID novel_ath_miR264
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:16722689-16722821 [-]
Reference genome TAIR10
Source SRR2087892
Length 23
Mature sequence(if miRNA) 111 - AACUCUUAAAAACUCUUGUAAAU - 133
Stem-loop(if miRNA) ---AA         A  C       -    G    -  UAUU     AG    UCAAA   UU   AAAGAU
     CUCUUAAAA CU UUGUAAA UCUU UAAA AC    GUAAA  AUUU     UGA  UCC      U
     ||||||||| || ||||||| |||| |||| ||    |||||  ||||     |||  |||
     GAGAAUUUU GA AAUAUUU AGAA AUUU UG    CAUUU  UGAA     AUU  AGG      U
UUUCG         A  -       C    -    A  UAUU     -A    -----   UU   AAAAAA
Stem-loop sequence AACUCUUAAAAACUCUUGUAAAUCUUGUAAAACUAUUGUAAAAGAUUUUCAAAUGAUUUCCAAAGAUUUAAAAAAGGAUUUUAAAGUAUUUACUUAUGUAUUUAAAGACUUUAUAAAGAUUUUAAGAGGCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_121879.6
ncRNA:23   UAAAUGUUCUCAAAAAUUCUCAA   1
  |*|||*|||||||||||||*|||
targets:2038   AGUUAAAAGAGUUUUUAAGUGUU   2060

2.5 Arabidopsis thaliana hypothetical protein (DUF3444) mRNA hypothetical protein (DUF3444)(AT5G18740) coding protein psRNATarget