ncRNA ID | novel_ath_miR264 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:16722689-16722821 [-] |
Reference genome | TAIR10 |
Source | SRR2087892 |
Length | 23 |
Mature sequence(if miRNA) | 111 - AACUCUUAAAAACUCUUGUAAAU - 133 |
Stem-loop(if miRNA) |
---AA         A  C       -    G    -  UAUU     AG    UCAAA   UU   AAAGAU      CUCUUAAAA CU UUGUAAA UCUU UAAA AC    GUAAA  AUUU     UGA  UCC      U      ||||||||| || ||||||| |||| |||| ||    |||||  ||||     |||  |||      GAGAAUUUU GA AAUAUUU AGAA AUUU UG    CAUUU  UGAA     AUU  AGG      U UUUCG         A  -       C    -    A  UAUU     -A    -----   UU   AAAAAA |
Stem-loop sequence | AACUCUUAAAAACUCUUGUAAAUCUUGUAAAACUAUUGUAAAAGAUUUUCAAAUGAUUUCCAAAGAUUUAAAAAAGGAUUUUAAAGUAUUUACUUAUGUAUUUAAAGACUUUAUAAAGAUUUUAAGAGGCUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_121879.6 |
|
2.5 | Arabidopsis thaliana hypothetical protein (DUF3444) mRNA | hypothetical protein (DUF3444)(AT5G18740) | coding protein | psRNATarget |