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BaseInfo

ncRNA ID ath-miRf10462-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CACUCGACCACGAGAUCGAGUG - NA
Stem-loop(if miRNA)    AC       C CACA       --CA    ACAUCA
GAG  CACUCGA C    GGUCGAG    GAGG      C
|||  ||||||| |    |||||||    ||||
CUC  GUGAGCU G    CCAGCUC    CUUC      C
   CC       A AGCA       ACCA    ACUUCA
Stem-loop sequence GAGACCACUCGACCCACAGGUCGAGCAGAGGACAUCACCACUUCACUUCACCACUCGACCACGAGAUCGAGUGCCCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183311.1
ncRNA:22   GUGAGCUAGAGCACCAGCUCAC   1
  =||||||*|||||||||||||*
targets:579   UACUCGAGCUCGUGGUCGAGUA   600

2.0 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget
NM_103391.1
ncRNA:22   GUGAGCUAGAGCACCAGCUCAC   1
  |||||||*|*||||||||||||
targets:1210   CACUCGACCCCGUGGUCGAGUG   1231

2.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
EF183005.1
ncRNA:22   GUGAGCUAGAGCACCAGCUCAC   1
  |||||||*||||*|||||||||
targets:1865   CACUCGACCUCGAGGUCGAGUG   1886

2.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget
EF183005.1
ncRNA:22   GUGAGCUAGAGCACCAGCUCAC   1
  =||||||*|||*||||||||||
targets:2015   UACUCGACCUCUUGGUCGAGUG   2036

2.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget