ncRNA ID | novel_ath_miR258 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:11010712-11010894 [+] |
Reference genome | TAIR10 |
Source | ERR1297332 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGAUACAUUGGUAUGUGAGGCU - 24 |
Stem-loop(if miRNA) |
--AA        U   A  --UG   CU     --AGA    -----G    --G        GAA       C   -------    UC      A     U     GGAUACAU GGU UG    AGG  UAUGG     AAUU      CAGU   GACUUGGA   AAGAUUU GAG       CAUU  GCAAGA UAAUG U     |||||||| ||| ||    |||  |||||     ||||      ||||   ||||||||   ||||||| |||       ||||  |||||| |||||     CCUAUGUA CCA AC    UCC  GUAUC     UUAG      GUCA   UUGGACCU   UUUUAGA UUC       GUGG  CGUUCU GUUAU G AAGA        -   -  UAUA   AC     AAUUG    AAUUUG    AUG        --A       -   UUAGAAG    UU      C     U |
Stem-loop sequence | AAGGAUACAUUGGUAUGUGAGGCUUAUGGAGAAAUUGCAGUGGACUUGGAGAAAAGAUUUCGAGCAUUUCGCAAGAAUAAUGUUGUUAUUGCUCUUGCUUGGUGGAAGAUUCUUAGAUUUUAUCCAGGUUGUAACUGGUUUAAGAUUGUUAACUAUGCACCUAUAUCAACCAUGUAUCCAGAA |