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BaseInfo

ncRNA ID novel_ath_miR258
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:11010712-11010894 [+]
Reference genome TAIR10
Source ERR1297332
Length 24
Mature sequence(if miRNA) 1 - AAGGAUACAUUGGUAUGUGAGGCU - 24
Stem-loop(if miRNA) --AA        U   A  --UG   CU     --AGA    -----G    --G        GAA       C   -------    UC      A     U
    GGAUACAU GGU UG    AGG  UAUGG     AAUU      CAGU   GACUUGGA   AAGAUUU GAG       CAUU  GCAAGA UAAUG U
    |||||||| ||| ||    |||  |||||     ||||      ||||   ||||||||   ||||||| |||       ||||  |||||| |||||
    CCUAUGUA CCA AC    UCC  GUAUC     UUAG      GUCA   UUGGACCU   UUUUAGA UUC       GUGG  CGUUCU GUUAU G
AAGA        -   -  UAUA   AC     AAUUG    AAUUUG    AUG        --A       -   UUAGAAG    UU      C     U
Stem-loop sequence AAGGAUACAUUGGUAUGUGAGGCUUAUGGAGAAAUUGCAGUGGACUUGGAGAAAAGAUUUCGAGCAUUUCGCAAGAAUAAUGUUGUUAUUGCUCUUGCUUGGUGGAAGAUUCUUAGAUUUUAUCCAGGUUGUAACUGGUUUAAGAUUGUUAACUAUGCACCUAUAUCAACCAUGUAUCCAGAA