ncRNA ID | novel_ath_miR257 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:2496674-2496779 [-] |
Reference genome | TAIR10 |
Source | SRR2087892;ERR654971;ERR654974;ERR654975 |
Length | 24 |
Mature sequence(if miRNA) | 83 - AAAACAAACCCUGAACUAAAACCU - 106 |
Stem-loop(if miRNA) |
--                                           AAC  UGU   AAAACAAACCCUGAACUAAAACCUGUUAAUAAACUUAACCCUA   GU   U   |||||||||||||||||||||||||||||||||||||||||||   ||   U   UUUUGUUUGGGACUUGAUUUUGGACAAUUAUUUGAAUUGGGGU   CA   A CA                                           -GU  UUA |
Stem-loop sequence | AAAACAAACCCUGAACUAAAACCUGUUAAUAAACUUAACCCUAAACGUUGUUUAAUUACUGUGGGGUUAAGUUUAUUAACAGGUUUUAGUUCAGGGUUUGUUUUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_102610.4 |
|
3.0 | Arabidopsis thaliana homeobox-1 (HB-1), mRNA | homeobox-1(HB-1) | coding protein | psRNATarget |