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BaseInfo

ncRNA ID novel_ath_miR257
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:2496674-2496779 [-]
Reference genome TAIR10
Source SRR2087892;ERR654971;ERR654974;ERR654975
Length 24
Mature sequence(if miRNA) 83 - AAAACAAACCCUGAACUAAAACCU - 106
Stem-loop(if miRNA) --                                           AAC  UGU
  AAAACAAACCCUGAACUAAAACCUGUUAAUAAACUUAACCCUA   GU   U
  |||||||||||||||||||||||||||||||||||||||||||   ||   U
  UUUUGUUUGGGACUUGAUUUUGGACAAUUAUUUGAAUUGGGGU   CA   A
CA                                           -GU  UUA
Stem-loop sequence AAAACAAACCCUGAACUAAAACCUGUUAAUAAACUUAACCCUAAACGUUGUUUAAUUACUGUGGGGUUAAGUUUAUUAACAGGUUUUAGUUCAGGGUUUGUUUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_102610.4
ncRNA:24   UCCAAAAUCAAGUCCCAAACAAAA   1
  *|*||||=|*|||||||||||||*
targets:349   CGUUUUUGGAUCAGGGUUUGUUUG   372

3.0 Arabidopsis thaliana homeobox-1 (HB-1), mRNA homeobox-1(HB-1) coding protein psRNATarget