ncRNA ID | novel_ath_miR255 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:2496679-2496784 [+] |
Reference genome | TAIR10 |
Source | SRR2087892;ERR654969;ERR654971;ERR654975 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAACAAACCCUGAACUAAAACCU - 24 |
Stem-loop(if miRNA) |
--                                         -CACA  AAU   AAAACAAACCCUGAACUAAAACCUGUUAAUAAACUUAACCC     GU   U   |||||||||||||||||||||||||||||||||||||||||     ||   A   UUUUGUUUGGGACUUGAUUUUGGACAAUUAUUUGAAUUGGG     CA   A CA                                         AUUUG  ACA |
Stem-loop sequence | AAAACAAACCCUGAACUAAAACCUGUUAAUAAACUUAACCCCACAGUAAUUAAACAACGUUUAGGGUUAAGUUUAUUAACAGGUUUUAGUUCAGGGUUUGUUUUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_102610.4 |
|
3.0 | Arabidopsis thaliana homeobox-1 (HB-1), mRNA | homeobox-1(HB-1) | coding protein | psRNATarget |