Search result

BaseInfo

ncRNA ID novel_ath_miR254
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:14311810-14311972 [+]
Reference genome TAIR10
Source SRR2087892
Length 24
Mature sequence(if miRNA) 1 - AUUAAGAUGAGUAUCAGUGAUUGU - 24
Stem-loop(if miRNA) --    A    A         AU       UAAAUUUUUGACCAACUU     UUC           UUAUA GG  -  AAUUA    C   A
  AUUA GAUG GUAUCAGUG  UGUACUA                  UUUAU   AUCUUUGUUUG     G  AC CA     CAAA ACC U
  |||| |||| |||||||||  |||||||                  |||||   |||||||||||     |  || ||     |||| |||
  UAAU CUAC UAUGGUCAU  ACAUGGU                  AGAUA   UAGAAACAGAC     C  UG GU     GUUU UGG G
UG    C    G         GU       ------------------     UUU           --CUG UU  C  ----A    U   U
Stem-loop sequence AUUAAGAUGAGUAUCAGUGAUUGUACUAUAAAUUUUUGACCAACUUUUUAUUUCAUCUUUGUUUGUUAUAGGGACCAAAUUACAAACACCAUGUGGUUUUUGAUGCGUUUCGUCCAGACAAAGAUUUUAUAGAUGGUACAUGUACUGGUAUGCAUCCUAAUGU