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BaseInfo

ncRNA ID novel_ath_miR252
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:5346740-5346800 [+]
Reference genome TAIR10
Source SRR2087892
Length 22
Mature sequence(if miRNA) 40 - AUUGUCGUCAGGUAUUGUGUCU - 61
Stem-loop(if miRNA) GCUGCAAAUCUUCAUA  UU     AAAC   U UUU
                AC  CAAUA    GCG C   G
                ||  |||||    ||| |
                UG  GUUAU    UGC G   A
--------------UC  -U     GGAC   U UUA
Stem-loop sequence GCUGCAAAUCUUCAUAACUUCAAUAAAACGCGUCUUUGAAUUGUCGUCAGGUAUUGUGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK230046.1
ncRNA:22   UCUGUG-UUAUGGACUGCUGUUA   1
  *|||*|-||||||||||||||||
targets:37   UGACUCCAAUACCUGACGACAAU   59

3.0 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-63-D12 NA coding protein psRNATarget