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BaseInfo

ncRNA ID	novel_ath_miR245
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:15762158-15762209 [+]
Reference genome	TAIR10
Source	SRR2087892
Length	24
Mature sequence(if miRNA)	29 - AAUCAUCUCGAGGAUGGACUGGAC - 52
Stem-loop(if miRNA)	--G   -   A    U    -    AC    CAG CCA CCUU GAGA GAUU  A    ||| ||| |||| |||| ||||  A    GUC GGU GGAG CUCU CUAA  C CAG   A   A    -    A    GC
Stem-loop sequence	GCAGCCAACCUUUGAGAGAUUACAACCGAAUCAUCUCGAGGAUGGACUGGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AF488617.1	ncRNA:24   CAGGUCAGGUAGGAGCUCUACUAA   1   |||=*||=|||||||*|||||||| targets:551   GUCUUGUUCAUCCUCAAGAUGAUU   574 Target Full Sequence	2.5	Arabidopsis thaliana clone bHLH087 putative bHLH transcription factor mRNA, complete cds	NA	coding protein	psRNATarget
BT020364.1	ncRNA:24   CAGGUCAGGUAGGAGCUCUACUAA   1   |||=*||=|||||||*|||||||| targets:551   GUCUUGUUCAUCCUCAAGAUGAUU   574 Target Full Sequence	2.5	Arabidopsis thaliana At3g21330 gene, complete cds	NA	coding protein	psRNATarget
NM_113028.3	ncRNA:24   CAGGUCAGGUAGGAGCUCUACUAA   1   |||=*||=|||||||*|||||||| targets:898   GUCUUGUUCAUCCUCAAGAUGAUU   921 Target Full Sequence	2.5	Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding superfamily protein mRNA	basic helix-loop-helix (bHLH) DNA-binding superfamily protein(AT3G21330)	coding protein	psRNATarget
BT004279.1	ncRNA:24   CAGGUCAGGUAGGAGCUCUACUAA   1   |||=*||=|||||||*|||||||| targets:898   GUCUUGUUCAUCCUCAAGAUGAUU   921 Target Full Sequence	2.5	Arabidopsis thaliana clone RAFL16-03-H17 (R50113) unknown protein (At3g21330) mRNA, complete cds	NA	coding protein	psRNATarget