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BaseInfo

ncRNA ID novel_ath_miR241
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:14864847-14864898 [+]
Reference genome TAIR10
Source SRR2087891
Length 24
Mature sequence(if miRNA) 29 - UGUUCGAUCCACGCUCACCGCACC - 52
Stem-loop(if miRNA) --                 U   G U
  UGCGGUGAGCGUGGAUC GAA G C
  ||||||||||||||||| ||| | G
  ACGCCACUCGCACCUAG CUU U C
CC                 -   G G
Stem-loop sequence UGCGGUGAGCGUGGAUCUGAAGGUCGCGUGUUCGAUCCACGCUCACCGCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK229817.1
ncRNA:24   CCACGCCACUCGCACCUAGCUUGU   1
  **||||||||||||||||||||||
targets:134   UUUGCGGUGAGCGUGGAUCGAACA   157

0.0 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-90-J23 NA coding protein psRNATarget