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BaseInfo

ncRNA ID novel_ath_miR239
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:20499805-20499889 [+]
Reference genome TAIR10
Source SRR2087891
Length 23
Mature sequence(if miRNA) 1 - CACAUGAAAAUCCUCAAGGGCCA - 23
Stem-loop(if miRNA) -CA   G          -      A   UUAG  UG  CAGA
   CAU AAAAUCCUCA AGGGCC UUA    UA  AU    U
   ||| |||||||||| |||||| |||    ||  ||    U
   GUA UUUUAGGAGU UUUCGG GAU    AU  UA    A
CAG   G          A      G   UGGA  GU  AAAU
Stem-loop sequence CACAUGAAAAUCCUCAAGGGCCAUUAUUAGUAUGAUCAGAUUAUAAAAUUGUAAGGUUAGGGGCUUUAUGAGGAUUUUGAUGGAC