ncRNA ID | novel_ath_miR227 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:1040952-1041032 [+] |
Reference genome | TAIR10 |
Source | SRR1986039 |
Length | 20 |
Mature sequence(if miRNA) | 62 - UGUGUUCUCAGGUCACCCCU - 81 |
Stem-loop(if miRNA) |
--GA     A  U       --UA  CU        UUCAAA     GUGGC UG GAACACA    UC  AUGGUUUC      U     ||||| || |||||||    ||  ||||||||     CACUG AC CUUGUGU    AG  UACCAAAG      U UCCC     G  U       UUUG  -U        UUACCU |
Stem-loop sequence | GAGUGGCAUGUGAACACAUAUCCUAUGGUUUCUUCAAAUUUCCAUUGAAACCAUUGAGUUUUGUGUUCUCAGGUCACCCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_121459.5 |
|
0.0 | Arabidopsis thaliana Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein mRNA | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein(AT5G14550) | coding protein | psRNATarget |