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BaseInfo

ncRNA ID	novel_ath_miR225
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:9236391-9236544 [+]
Reference genome	TAIR10
Source	SRR1986039
Length	22
Mature sequence(if miRNA)	133 - UCUUGUAAAUCUUUAAAACCCU - 154
Stem-loop(if miRNA)	--U      C                        -       UAAAAUU      AG               -CUU UA    GUUUUA AAGAUUUACAAGAGAUUUUAAAAG GUUUUAA       UACAAG  UUUUUAAAGGAUUUU    G  A    |||||| |||||||||||||||||||||||| |||||||       ||||||  |||||||||||||||    |    CAAAAU UUCUAAAUGUUCUUUAAAAUUUUC CAAAAUU       AUGUUC  AAAAAUUUUCUAAAA    C  A UCC      -                        U       -UUCUAC      CU               AUUU UU
Stem-loop sequence	UGUUUUACAAGAUUUACAAGAGAUUUUAAAAGGUUUUAAUAAAAUUUACAAGAGUUUUUAAAGGAUUUUCUUGUAAAUUCUUUAAAAAUCUUUUAAAAAUCCUUGUACAUCUUUUAAAACUCUUUUAAAAUUUCUUGUAAAUCUUUAAAACCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_128070.5	ncRNA:22   UCCCAA-AAUUUCUAAAUGUUCU   1   *|*|||-|||||||||||||||* targets:535   CGUGUUGUUAAAGAUUUACAAGC   557 Target Full Sequence	3.0	Arabidopsis thaliana ARM repeat superfamily protein mRNA	ARM repeat superfamily protein(AT2G25130)	coding protein	psRNATarget
AY144104.1	ncRNA:22   UCCCAA-AAUUUCUAAAUGUUCU   1   *|*|||-|||||||||||||||* targets:337   CGUGUUGUUAAAGAUUUACAAGC   359 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (At2g25130/F13D4.90) mRNA, complete cds	NA	coding protein	psRNATarget
BX819412.1	ncRNA:22   UCCCAA-AAUUUCUAAAUGUUCU   1   *|*|||-|||||||||||||||* targets:360   CGUGUUGUUAAAGAUUUACAAGC   382 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZA03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY649296.1	ncRNA:22   UCCCAA-AAUUUCUAAAUGUUCU   1   *|*|||-|||||||||||||||* targets:319   CGUGUUGUUAAAGAUUUACAAGC   341 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (At2g25130) mRNA, complete cds	NA	coding protein	psRNATarget