ncRNA ID | novel_ath_miR221 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:15218595-15218682 [+] |
Reference genome | TAIR10 |
Source | SRR1986039 |
Length | 25 |
Mature sequence(if miRNA) | 1 - GAGACUUGAGACAGAACAUUGAUCC - 25 |
Stem-loop(if miRNA) |
--     UU     A      U     ---  -  U    CCC  G   GAGAC  GAGAC GAACAU GAUCC   UG CU GGUA   UC G   |||||  ||||| |||||| |||||   || || ||||   || C   CUUUG  CUUUG CUUGUA CUAGG   AC GA CUAU   AG U CA     UU     G      -     UAU  A  U    AAA  U |
Stem-loop sequence | GAGACUUGAGACAGAACAUUGAUCCUGCUUGGUACCCUCGGCUUGAAAAUAUCUAGACAUAUGGAUCAUGUUCGGUUUCUUGUUUCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BX820055.1 |
|
1.5 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZD05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget |