ncRNA ID | novel_ath_miR218 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:10378298-10378515 [+] |
Reference genome | TAIR10 |
Source | SRR1986039 |
Length | 21 |
Mature sequence(if miRNA) | 198 - AGAGUAGGGUUGGAGAUGCCC - 218 |
Stem-loop(if miRNA) |
--UG              C  UUU     U   ACUAACUAUAUUCAUUAGCAACUUAAUUCUACAUUGAUUUUAGAGUAUAAGAUAAGAGAAAUUUUUGUGUUGCCAA     AUUUUCAAUUUUAC CU   GUAAA UCU                                                                            U     |||||||||||||| ||   ||||| |||                                                                            U     UAGAGGUUGGGAUG GA   CAUUU UAC                                                                            U CCCG              A  -UU     U   GUUUUGUAAAGAGAUUGGGAUGAGAUAUUAACUAAGAUUUUAUCUCUAAAGACGUUGAGAUAUAUAUUCACAAUUG |
Stem-loop sequence | UGAUUUUCAAUUUUACCCUUUUGUAAAUUCUACUAACUAUAUUCAUUAGCAACUUAAUUCUACAUUGAUUUUAGAGUAUAAGAUAAGAGAAAUUUUUGUGUUGCCAAUUUGUUAACACUUAUAUAUAGAGUUGCAGAAAUCUCUAUUUUAGAAUCAAUUAUAGAGUAGGGUUAGAGAAAUGUUUUGCAUUUUUACUUAGAGUAGGGUUGGAGAUGCCC |