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BaseInfo

ncRNA ID	novel_ath_miR215
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr2:1773588-1773710 [+]
Reference genome	TAIR10
Source	SRR1986038;SRR1986040
Length	21
Mature sequence(if miRNA)	103 - UCAUUGAAGAGUCGAUCAAUG - 123
Stem-loop(if miRNA)	--            C    A     CUAUUC                     GU  UACAU   UUGAUCGACUCU CAGU AAAUU      UUUCAACAUUGAAGAGAUGUU  CG     U   |||||||||||| |||| |||||      |||||||||||||||||||||  ||     C   AACUAGCUGAGA GUUA UUUAA      AAAGUUGUAACUUCUCUACGA  GU     U GU            A    C     AGCAUA                     AG  UAUCU
Stem-loop sequence	UUGAUCGACUCUCCAGUAAAAUUCUAUUCUUUCAACAUUGAAGAGAUGUUGUCGUACAUUCUUCUAUUGGAAGCAUCUCUUCAAUGUUGAAAAUACGAAAUUUCAUUGAAGAGUCGAUCAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY142654.1	ncRNA:21   GUAACUAGCUGAGAAGUUACU   1   *=|||||*|||||||||*||| targets:1038   AGUUGAUGGACUCUUCACUGA   1058 Target Full Sequence	2.5	Arabidopsis thaliana putative glycerophosphodiester phosphodiesterase (At1g74210) mRNA, complete cds	NA	coding protein	psRNATarget
BX816255.1	ncRNA:21   GUAACUAGCUGAGAAGUUACU   1   *=|||||*|||||||||*||| targets:1033   AGUUGAUGGACUCUUCACUGA   1053 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX814846.1	ncRNA:21   GUAACUAGCUGAGAAGUUACU   1   *=|||||*|||||||||*||| targets:1070   AGUUGAUGGACUCUUCACUGA   1090 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX814428.1	ncRNA:21   GUAACUAGCUGAGAAGUUACU   1   *=|||||*|||||||||*||| targets:1116   AGUUGAUGGACUCUUCACUGA   1136 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY086343.1	ncRNA:21   GUAACUAGCUGAGAAGUUACU   1   *=|||||*|||||||||*||| targets:1081   AGUUGAUGGACUCUUCACUGA   1101 Target Full Sequence	2.5	Arabidopsis thaliana clone 24182 mRNA, complete sequence	NA	coding protein	psRNATarget
BX814399.1	ncRNA:21   GUAACUAGCUGAGAAGUUACU   1   *=|||||*|||||||||*||| targets:1115   AGUUGAUGGACUCUUCACUGA   1135 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY064037.1	ncRNA:21   GUAACUAGCUGAGAAGUUACU   1   *=|||||*|||||||||*||| targets:1118   AGUUGAUGGACUCUUCACUGA   1138 Target Full Sequence	2.5	Arabidopsis thaliana putative glycerophosphodiester phosphodiesterase (At1g74210) mRNA, complete cds	NA	coding protein	psRNATarget
NM_106081.3	ncRNA:21   GUAACUAGCUGAGAAGUUACU   1   *=|||||*|||||||||*||| targets:1120   AGUUGAUGGACUCUUCACUGA   1140 Target Full Sequence	2.5	Arabidopsis thaliana PLC-like phosphodiesterases superfamily protein (GDPD5), mRNA	PLC-like phosphodiesterases superfamily protein(GDPD5)	coding protein	psRNATarget