ncRNA ID | novel_ath_miR214 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:8239003-8239222 [-] |
Reference genome | TAIR10 |
Source | SRR1986038 |
Length | 24 |
Mature sequence(if miRNA) | 197 - UUUACAAGGAACUUUAAAGGGCUU - 220 |
Stem-loop(if miRNA) |
--        GA C        -GC                AU     -----------GU        UUA     --        U                   A         A   UUUACAAG  A UUUAAAGG   UUUAAAAGAUUUACAA  GAUUU             AAAGAUUU   AAGGG  UUUAAAAG GUUUUGAAAGAUUUACAAG GAUUUUAAA C   ||||||||  | ||||||||   ||||||||||||||||  |||||             ||||||||   |||||  |||||||| ||||||||||||||||||| |||||||||   AAAUGUUC  U AAAUUUUU   AAAUUUUCUAAAUGUU  CUAAA             UUUCUAAA   UUCCC  AAAUUUUC CAAAAUUUUUUAAAUGUUC UUAAAAUUU C CU        UC -        ACA                CU     AUUUUCUCAAAAU        -UG     UA        C                   A         U |
Stem-loop sequence | UUUACAAGGAACUUUAAAGGGCUUUAAAAGAUUUACAAAUGAUUUGUAAAGAUUUUUAAAGGGUUUAAAAGUGUUUUGAAAGAUUUACAAGAGAUUUUAAAACCUUUUAAAAUUACUUGUAAAUUUUUUAAAACCCUUUUAAAAUCCCUUGUAAAUCUUUUAAAACUCUUUUAAAAUCUCUUGUAAAUCUUUUAAAACAUUUUUAAAUCUCUUGUAAAUC |