Search result

BaseInfo

ncRNA ID novel_ath_miR204
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:21951846-21952039 [-]
Reference genome TAIR10
Source SRR1986037
Length 19
Mature sequence(if miRNA) 176 - AAUACUGAUUUGUGUGAAG - 194
Stem-loop(if miRNA) --     UG    GU        -       --------GGAA      A    ---AA      G UUUCUUUACGAGCAGACCAAGCACUUGAAGUUGCUU
  AAUAC  AUUU  GUGAAGGU UGAAUCG            UUCGUC UGCU     GAGGAG C                                    C
  |||||  ||||  |||||||| |||||||            |||||| ||||     |||||| |                                    U
  UUAUG  UAAG  UAUUUCCG AUUUGGC            AGGUAG ACGA     CGUCGA A                                    C
GU     GU    UC        U       AAACAUGGUUAG      A    AUUAC      - AGUUUAGUUCGACGUUUAAAAGCUUCUUGGAUUCUU
Stem-loop sequence AAUACUGAUUUGUGUGAAGGUUGAAUCGGGAAUUCGUCAUGCUAAGAGGAGGCUUUCUUUACGAGCAGACCAAGCACUUGAAGUUGCUUCUCUUCUUAGGUUCUUCGAAAAUUUGCAGCUUGAUUUGAAAGCUGCCAUUAAGCAAGAUGGAGAUUGGUACAAACGGUUUAUGCCUUUAUCUGAAUUGGUAUUUG